Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017155.1 Corchorus olitorius cultivar O-4 contig17188, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20401

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
962--998
19
2.0
19
94
5
67
32
0
0
67
0.91
968--1009
19
2.2
19
86
0
57
38
2
0
59
1.10
1515--1573
15
3.9
15
77
16
59
3
16
0
79
0.86
1531--1574
12
3.5
13
78
12
56
0
18
0
81
0.68
1654--1752
18
5.2
18
65
26
53
5
41
39
14
1.67
1659--1755
38
2.5
38
89
1
149
5
42
38
14
1.68
4977--5041
21
3.1
21
62
16
53
50
15
6
27
1.67
4964--5046
42
2.0
42
95
0
148
45
15
8
30
1.76
5110--5222
55
2.0
56
93
1
192
42
1
22
33
1.64
17473--17530
22
2.6
22
97
0
107
18
10
13
56
1.65
17517--17575
25
2.4
24
81
10
66
18
1
13
66
1.34
18167--18191
2
12.5
2
100
0
50
52
0
0
48
1.00
19229--19271
21
2.0
21
82
8
52
53
4
9
32
1.53

Tables:   1

The End!