Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017162.1 Corchorus olitorius cultivar O-4 contig17195, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31790

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
483--515
2
16.5
2
93
0
57
48
0
3
48
1.17
1114--1154
20
2.0
20
100
0
82
29
4
14
51
1.63
1318--1353
2
18.0
2
100
0
72
50
0
0
50
1.00
20831--20954
62
2.0
62
96
0
230
24
33
7
34
1.83
30042--30075
15
2.3
15
90
5
52
32
0
2
64
1.08

Tables:   1

The End!