Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017163.1 Corchorus olitorius cultivar O-4 contig17196, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19919

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7319--7374
21
2.8
20
78
5
60
35
5
21
37
1.76
16729--16769
3
13.3
3
84
5
55
65
0
26
7
1.18
16727--16764
19
2.0
19
94
0
67
63
0
23
13
1.30
17161--17224
21
3.2
20
77
8
76
29
18
12
39
1.88
17161--17218
19
2.9
19
82
5
62
29
18
12
39
1.87
18787--18882
31
3.1
31
89
0
129
39
11
14
34
1.82
19035--19273
126
1.9
124
87
3
345
52
1
10
35
1.45

Tables:   1

The End!