Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017168.1 Corchorus olitorius cultivar O-4 contig17201, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22349

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
209--279
22
3.2
23
71
18
69
59
2
2
35
1.27
414--530
16
7.3
16
100
0
234
11
56
31
0
1.36
2352--2410
19
3.0
19
83
9
82
35
5
18
40
1.73
2352--2412
21
3.0
20
86
6
88
36
4
18
40
1.72
2891--2949
19
3.0
19
80
9
73
37
10
18
33
1.85
4165--4190
13
2.0
13
100
0
52
30
0
0
69
0.89
4696--4883
96
2.0
96
95
0
340
32
11
21
34
1.89
6055--6099
15
2.9
15
80
6
54
51
13
0
35
1.41
6301--6337
20
1.9
20
88
5
58
29
2
0
67
1.04
6460--6484
13
1.9
13
100
0
50
36
0
16
48
1.46
18919--19096
89
2.0
89
98
0
347
26
17
21
34
1.95

Tables:   1

The End!