Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017173.1 Corchorus olitorius cultivar O-4 contig17206, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37207

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1332--2070
328
2.2
333
79
8
848
31
15
16
36
1.90
2068--2152
31
2.7
31
100
0
170
36
12
18
31
1.89
2289--3052
327
2.3
332
79
7
844
34
13
15
36
1.87
15241--15278
19
2.0
20
94
5
69
28
2
5
63
1.30
16600--16860
105
2.5
104
86
4
346
41
8
7
42
1.63
23031--23079
24
2.0
24
96
0
89
14
20
26
38
1.91
23850--23922
2
37.0
2
74
17
55
43
2
2
50
1.30
27193--27253
13
4.7
13
83
0
77
19
16
8
55
1.65
27242--27357
38
3.1
38
84
0
169
13
12
17
56
1.66
27222--27353
13
10.2
13
70
12
76
12
12
16
57
1.65
27362--27412
20
2.5
21
81
9
70
17
9
11
60
1.57

Tables:   1

The End!