Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017176.1 Corchorus olitorius cultivar O-4 contig17209, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31007

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
798--828
14
2.2
14
94
0
53
45
19
16
19
1.86
17196--17243
24
2.0
24
100
0
96
20
20
12
45
1.83
21299--21368
27
2.5
28
95
2
124
41
10
15
32
1.81
22022--22101
40
2.0
40
100
0
160
40
17
17
25
1.91
27302--27925
316
2.0
315
95
0
1122
27
16
17
38
1.91
28696--28747
25
2.2
24
86
6
70
48
3
11
36
1.58
30774--30845
23
3.2
23
67
25
55
30
1
9
58
1.39

Tables:   1

The End!