Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017180.1 Corchorus olitorius cultivar O-4 contig17213, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24920

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1279--1401
22
5.8
22
74
12
87
37
10
12
39
1.77
1325--1403
40
2.0
40
87
5
115
40
11
8
39
1.72
1414--1456
22
2.0
22
95
0
77
34
11
20
32
1.89
1364--1466
22
4.7
22
77
4
75
37
11
14
35
1.83
1561--1617
21
2.6
22
78
15
73
29
8
21
40
1.83
1531--1695
22
7.5
22
70
9
70
36
10
17
35
1.85
4750--4783
16
2.1
17
94
5
61
26
47
20
5
1.73
10404--10429
11
2.4
11
100
0
52
7
15
7
69
1.35
11165--11221
15
3.7
15
92
2
78
12
8
14
64
1.48
11175--11221
15
3.1
15
96
0
85
12
10
14
61
1.56
11566--11629
32
2.0
32
84
9
85
35
6
14
43
1.70
16667--16727
29
2.0
31
84
6
81
39
6
16
37
1.75
17306--17331
11
2.4
11
100
0
52
7
15
7
69
1.35
18066--18108
15
2.8
15
85
3
59
9
9
13
67
1.42
23900--23924
11
2.3
11
100
0
50
64
28
0
8
1.22

Tables:   1

The End!