Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017181.1 Corchorus olitorius cultivar O-4 contig17214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35365

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5126--5155
12
2.4
13
88
11
53
13
6
13
66
1.43
5366--5397
16
1.9
17
93
6
57
9
9
0
81
0.88
11059--11222
69
2.4
69
96
1
303
36
20
20
22
1.95
15079--15108
12
2.4
13
88
11
53
13
6
13
66
1.43
17171--17216
24
1.9
24
95
0
83
36
10
15
36
1.82
18535--18616
22
3.7
22
85
0
101
40
10
9
39
1.74
18535--18714
22
8.5
21
68
18
83
36
14
9
40
1.78
18602--18672
37
1.9
37
85
2
99
39
9
11
39
1.74
18658--18777
22
5.5
22
72
15
95
31
16
5
45
1.71
29623--29647
2
12.5
2
100
0
50
48
0
0
52
1.00
31729--31786
25
2.2
27
82
17
77
39
0
0
60
0.97
33041--33149
55
1.9
55
83
10
141
25
9
19
45
1.79
34455--34489
2
17.5
2
100
0
70
48
0
0
51
1.00
34588--34881
29
10.1
29
82
2
313
19
16
22
42
1.89

Tables:   1

The End!