Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017186.1 Corchorus olitorius cultivar O-4 contig17219, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32798

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7362--7387
12
2.2
12
100
0
52
23
26
7
42
1.81
7812--7890
37
2.1
38
90
4
124
36
18
8
35
1.83
9589--9640
26
2.0
25
81
3
59
57
5
5
30
1.46
10772--10848
37
2.0
38
87
5
111
36
20
7
35
1.82
14930--15035
16
6.7
15
75
9
104
7
14
37
40
1.74
14930--15035
32
3.3
32
86
1
142
7
14
37
40
1.74
15009--15065
23
2.5
22
75
13
62
7
15
45
31
1.73
15198--15244
13
3.8
12
78
13
51
55
4
0
40
1.19
15498--15569
31
2.3
32
74
11
78
59
8
5
26
1.48
16548--16720
75
2.3
75
81
4
179
36
17
15
30
1.91
16659--16833
75
2.3
75
74
3
165
37
18
14
29
1.91
18291--18342
23
2.3
23
86
0
68
3
23
46
26
1.69
18332--18368
16
2.3
16
90
0
56
8
16
40
35
1.78
24135--24258
54
2.3
54
94
0
221
21
21
18
37
1.94

Tables:   1

The End!