Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017187.1 Corchorus olitorius cultivar O-4 contig17220, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38675

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11182--11279
45
2.2
45
85
5
128
33
5
19
41
1.73
13028--13064
15
2.5
15
100
0
74
18
43
0
37
1.51
22668--22966
76
4.0
76
87
3
426
14
26
37
21
1.92
22668--22967
151
2.0
149
91
2
485
15
26
37
21
1.92
30087--30234
75
2.0
75
93
0
251
40
9
11
38
1.74
34194--34228
10
3.4
10
84
7
52
37
11
20
31
1.88
34442--34513
28
2.6
28
90
0
117
25
20
20
33
1.97
38036--38080
12
3.5
12
84
9
54
55
11
2
31
1.47

Tables:   1

The End!