Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017191.1 Corchorus olitorius cultivar O-4 contig17224, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25714

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2308--2347
10
3.5
11
81
18
55
67
0
0
32
0.91
2311--2347
13
3.1
13
81
18
53
67
0
0
32
0.91
4814--4971
53
3.0
53
96
0
289
25
26
27
20
1.99
4967--5051
27
3.1
27
96
0
152
32
23
22
21
1.98
14160--14189
12
2.4
13
88
11
53
13
6
13
66
1.43
15645--15681
20
1.9
18
89
10
56
18
0
24
56
1.41
19031--19059
10
2.9
10
100
0
58
51
0
17
31
1.45
19334--20032
349
2.0
352
89
1
1080
32
17
19
30
1.95
20372--20400
2
15.0
2
92
7
51
48
0
0
51
1.00
24519--24559
21
2.0
21
85
9
57
34
9
26
29
1.88

Tables:   1

The End!