Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017198.1 Corchorus olitorius cultivar O-4 contig17231, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22756

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1532--1627
49
2.0
49
93
4
167
26
9
8
56
1.59
2376--2401
2
13.0
2
100
0
52
50
0
0
50
1.00
3736--4263
144
3.8
137
76
11
495
43
11
11
33
1.76
3979--4227
130
1.9
127
86
4
347
44
14
10
30
1.78
4113--4594
165
2.9
164
90
2
730
44
10
10
34
1.74
4498--4823
181
1.8
181
88
0
499
44
11
12
32
1.77
10310--10493
72
2.6
72
84
1
235
15
32
26
25
1.96
10452--10537
44
2.0
44
90
0
136
12
38
30
18
1.88
10380--10724
115
3.0
116
88
0
512
14
32
27
25
1.95
10611--10746
72
1.9
72
83
6
177
16
28
27
27
1.97

Tables:   1

The End!