Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017209.1 Corchorus olitorius cultivar O-4 contig17242, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21102

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4215--4251
19
2.0
18
89
5
56
40
8
21
29
1.82
13089--13127
17
2.2
18
90
9
62
35
5
20
38
1.75
14494--14535
15
2.7
15
88
3
57
9
11
14
64
1.50
17837--17878
21
2.0
21
86
9
59
19
52
21
7
1.69
18087--18135
22
2.3
21
82
3
62
16
46
20
16
1.83
18093--18133
22
1.9
22
90
5
66
17
48
21
12
1.79
19933--19971
17
2.2
18
90
9
62
35
5
20
38
1.75

Tables:   1

The End!