Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017217.1 Corchorus olitorius cultivar O-4 contig17250, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19329

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1514--1557
23
2.0
23
81
4
54
43
0
20
36
1.52
3351--3473
56
2.2
55
91
5
203
40
9
13
35
1.78
8119--8178
29
2.0
30
87
6
86
38
8
18
35
1.81
9557--9596
15
2.6
16
88
4
55
15
10
12
62
1.54
12871--12913
21
2.0
21
86
0
59
18
53
20
6
1.67
13255--13309
21
2.6
21
79
0
65
16
43
21
18
1.88
15147--15206
29
2.0
30
87
6
86
38
8
18
35
1.81
17983--18018
19
1.9
18
88
5
54
30
22
8
38
1.83

Tables:   1

The End!