Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017219.1 Corchorus olitorius cultivar O-4 contig17252, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16390

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1357--1385
2
14.5
2
100
0
58
48
0
0
51
1.00
1749--1785
19
1.9
19
88
0
56
32
16
13
37
1.87
2663--2727
29
2.2
29
80
0
76
13
9
30
46
1.75
10611--10688
31
2.5
31
85
0
102
16
21
33
28
1.95
13491--13546
29
1.9
29
85
0
76
10
10
33
44
1.74
13492--13554
29
2.2
29
82
0
72
12
9
33
44
1.75
14515--14587
32
2.3
31
83
6
94
8
17
38
35
1.80
14515--14587
16
4.6
16
73
11
62
8
17
38
35
1.80
15777--15807
13
2.3
14
94
5
55
61
0
0
38
0.96

Tables:   1

The End!