Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017228.1 Corchorus olitorius cultivar O-4 contig17261, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8437

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
807--890
15
5.9
14
69
18
57
53
3
2
40
1.31
810--892
30
3.0
27
86
10
130
51
3
3
40
1.37
1186--1223
11
3.5
11
85
10
51
57
2
0
39
1.12
2165--2211
12
3.7
12
75
25
51
53
0
2
44
1.12
2163--2214
15
3.7
15
75
15
65
53
0
1
44
1.11
2166--2218
27
2.0
27
100
0
106
52
0
3
43
1.19
3299--3364
33
2.0
33
90
0
105
27
18
13
40
1.88
4399--4479
39
2.0
40
90
2
128
51
7
2
38
1.43
4589--5000
203
2.0
204
95
2
749
36
10
8
44
1.70
5511--5580
36
1.9
36
91
0
113
60
8
10
21
1.55
6856--6965
58
1.9
58
85
7
152
34
19
13
32
1.91

Tables:   1

The End!