Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017229.1 Corchorus olitorius cultivar O-4 contig17262, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18199

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1070--1980
452
2.0
453
97
1
1738
32
12
14
40
1.84
2024--2055
16
2.0
16
93
0
55
43
6
3
46
1.44
5265--5430
31
5.5
31
70
16
150
33
21
18
25
1.96
5267--5429
60
2.7
60
96
0
299
34
21
19
25
1.96
5298--5398
29
3.4
29
69
15
89
33
20
18
26
1.96
11124--11219
48
2.0
48
95
0
174
25
23
4
46
1.70
12611--12650
13
2.8
14
85
14
55
42
12
15
30
1.83

Tables:   1

The End!