Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017235.1 Corchorus olitorius cultivar O-4 contig17268, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15182

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
506--790
79
3.6
79
95
3
495
33
11
24
29
1.91
1094--1156
33
1.9
33
87
6
92
41
38
14
6
1.71
1063--1154
16
5.6
16
71
13
62
40
39
13
7
1.72
2618--2652
16
2.2
16
100
0
70
28
45
20
5
1.73
5042--5090
24
2.0
24
96
0
89
28
26
8
36
1.85
5844--5887
22
2.0
22
91
4
72
56
2
0
40
1.11
7232--7367
68
2.0
67
91
4
220
36
13
0
48
1.49
9998--10128
66
2.0
64
94
2
226
16
16
32
34
1.91
14583--14610
14
2.0
14
100
0
56
50
7
14
28
1.69

Tables:   1

The End!