Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017240.1 Corchorus olitorius cultivar O-4 contig17273, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27982

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9295--9355
27
2.3
27
97
0
113
9
32
29
27
1.89
10691--10797
56
1.9
56
86
7
155
27
13
19
40
1.88
10825--10954
54
2.4
54
80
2
127
40
16
11
31
1.85
11136--11177
16
2.6
16
75
14
50
76
2
21
0
0.90
12313--12528
111
1.9
111
93
0
369
40
15
22
22
1.91
13854--13894
2
20.5
2
100
0
82
0
48
0
51
1.00
24270--24304
18
1.9
18
94
0
61
80
0
20
0
0.72
27954--27982
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!