Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017251.1 Corchorus olitorius cultivar O-4 contig17284, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17975

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23--118
41
2.3
41
82
5
104
20
18
13
46
1.83
1911--1964
28
1.9
28
96
0
99
33
16
18
31
1.93
1927--2014
38
2.3
38
83
16
121
35
14
19
30
1.92
12353--12436
33
2.5
36
77
13
97
30
10
9
48
1.70
17072--17136
29
2.2
29
94
0
112
50
6
9
33
1.59
17069--17139
28
2.5
28
91
6
117
49
7
8
35
1.60

Tables:   1

The End!