Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017260.1 Corchorus olitorius cultivar O-4 contig17293, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14751

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4907--5004
32
3.1
32
81
8
119
19
10
30
39
1.85
5809--5871
22
2.9
22
87
0
90
3
7
34
53
1.46
5847--5893
15
3.1
15
87
6
69
6
8
27
57
1.53
10966--11041
36
2.1
36
100
0
152
23
19
27
28
1.98
12991--13097
23
4.7
23
86
7
123
37
16
8
37
1.79
12974--13097
45
2.8
44
81
8
133
38
16
8
37
1.78
12791--13198
22
18.6
22
71
8
226
35
16
9
38
1.82
13284--13448
22
7.5
22
77
8
131
34
18
10
35
1.86
13215--13447
44
5.5
43
72
14
139
34
18
9
36
1.84
13614--13652
20
2.0
20
85
10
53
64
2
5
28
1.28
13893--13947
30
1.9
27
82
10
65
49
0
3
47
1.19

Tables:   1

The End!