Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017264.1 Corchorus olitorius cultivar O-4 contig17297, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34848

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3322--3357
19
1.9
18
88
5
54
33
22
2
41
1.68
3322--3368
11
4.7
10
80
17
53
31
21
6
40
1.78
14038--14073
17
2.1
17
100
0
72
25
5
16
52
1.65
14186--14377
48
3.9
48
88
6
303
30
19
22
27
1.98
14176--14378
101
2.0
101
98
0
388
31
20
21
27
1.98
20484--20535
18
2.9
17
78
16
52
55
5
23
15
1.61
23144--23177
10
3.5
10
96
4
61
55
0
8
35
1.31
26221--26270
21
2.4
21
76
6
57
72
12
6
10
1.28
32047--32096
21
2.4
21
76
6
57
72
12
6
10
1.28
34107--34132
13
2.0
13
100
0
52
23
0
15
61
1.33

Tables:   1

The End!