Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017266.1 Corchorus olitorius cultivar O-4 contig17299, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43103

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6351--6402
20
2.7
18
76
8
50
13
13
34
38
1.84
7108--7174
34
2.0
34
81
0
80
40
10
7
41
1.67
11720--11748
15
1.9
15
100
0
58
27
6
10
55
1.59
11764--11810
13
3.8
12
83
8
58
85
0
12
2
0.70
13469--13502
15
2.3
15
89
0
50
79
0
17
2
0.86
31051--31086
17
2.1
17
89
0
54
0
8
19
72
1.10
33452--33476
6
4.2
6
100
0
50
0
16
0
84
0.63
39142--39200
30
2.0
30
86
6
84
44
6
16
32
1.74
41252--41366
57
2.0
57
91
0
185
35
16
13
33
1.88
43058--43097
2
20.0
2
100
0
80
50
0
0
50
1.00

Tables:   1

The End!