Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017271.1 Corchorus olitorius cultivar O-4 contig17304, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2492

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
722--779
18
3.2
18
70
0
53
56
10
25
6
1.57
704--810
36
2.9
36
84
1
151
54
13
23
9
1.67
838--946
45
2.4
45
98
1
209
33
21
28
16
1.95
1691--2271
57
10.0
57
87
3
766
26
17
15
39
1.90
1691--2271
116
5.0
116
94
1
932
26
17
15
39
1.90
1691--2271
175
3.3
174
87
3
837
26
17
15
39
1.90

Tables:   1

The End!