Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017277.1 Corchorus olitorius cultivar O-4 contig17310, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3169

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
915--1017
8
13.6
8
75
17
78
66
0
9
23
1.20
915--992
4
19.0
4
76
10
77
71
0
6
21
1.08
920--1103
12
16.0
12
68
16
86
64
1
10
24
1.32
1033--1087
19
2.9
19
83
5
67
60
3
9
27
1.44
925--1140
27
8.0
27
68
16
99
62
1
9
25
1.34
1038--1142
46
2.3
46
93
0
174
61
2
7
27
1.37
2349--2489
34
4.0
35
83
6
176
42
20
9
27
1.82

Tables:   1

The End!