Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017281.1 Corchorus olitorius cultivar O-4 contig17314, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17886

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2460--2742
43
6.6
42
84
8
367
21
10
25
42
1.84
2451--2742
128
2.3
128
94
0
503
21
10
25
42
1.85
2460--2742
85
3.3
84
86
9
360
21
10
25
42
1.84
4544--4614
21
3.4
21
94
3
117
26
26
18
28
1.98
7838--7884
26
1.9
24
87
12
69
40
4
27
27
1.75
8752--8822
21
3.4
21
94
3
117
26
26
18
28
1.98
16905--17051
74
2.0
75
98
1
287
32
12
17
37
1.87
17103--17166
28
2.3
28
97
0
119
48
25
9
17
1.76

Tables:   1

The End!