Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017294.1 Corchorus olitorius cultivar O-4 contig17327, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12589

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
187--292
26
3.9
26
78
8
88
37
24
14
23
1.92
690--1029
35
9.7
35
88
5
476
28
21
19
30
1.98
1118--1166
23
2.1
23
100
0
98
22
22
24
30
1.99
5219--5953
379
1.9
379
94
1
1312
39
21
14
24
1.90
9004--9055
19
2.7
18
77
11
50
48
1
0
50
1.12
9408--9446
13
3.0
13
100
0
78
53
30
0
15
1.42

Tables:   1

The End!