Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017307.1 Corchorus olitorius cultivar O-4 contig17340, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14747

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2723--3660
262
3.6
261
94
1
1633
40
14
15
29
1.87
5123--5158
2
17.5
2
94
5
63
47
0
2
50
1.15
5961--6321
195
1.9
192
83
7
469
32
14
19
33
1.92
7209--8106
200
4.5
200
87
3
1191
34
14
16
34
1.89
8446--8477
16
2.0
16
93
0
55
56
0
9
34
1.32
9987--10072
2
46.0
2
75
13
76
51
1
2
45
1.21

Tables:   1

The End!