Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017309.1 Corchorus olitorius cultivar O-4 contig17342, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4187

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
702--743
22
1.9
22
85
0
57
42
26
16
14
1.86
948--985
11
3.5
11
85
10
51
57
2
0
39
1.12
1671--1703
17
1.9
17
88
11
50
39
0
0
60
0.97
2833--2908
24
3.1
24
70
7
71
15
42
39
2
1.61
2852--2885
13
2.6
13
95
0
59
11
38
47
2
1.55

Tables:   1

The End!