Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017311.1 Corchorus olitorius cultivar O-4 contig17344, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13139

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86--274
63
3.0
64
65
21
153
40
11
1
47
1.46
172--212
20
2.0
20
85
0
55
58
2
0
39
1.11
330--368
14
2.9
13
80
3
51
41
2
2
53
1.28
5723--5753
13
2.5
12
94
5
53
3
0
90
6
0.55
6956--7109
75
2.1
75
93
0
263
38
30
9
20
1.85
6988--7109
35
3.3
35
65
18
95
40
31
7
21
1.81
7144--7191
22
2.1
23
92
3
80
31
18
20
29
1.97

Tables:   1

The End!