Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017314.1 Corchorus olitorius cultivar O-4 contig17347, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30409

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16--44
2
14.5
2
100
0
58
51
0
0
48
1.00
93--146
26
2.1
26
82
3
65
40
0
11
48
1.39
16239--16370
29
4.6
29
80
10
155
16
18
22
41
1.90
23881--23913
2
16.5
2
100
0
66
48
0
0
51
1.00
25900--25938
10
3.9
10
80
12
53
20
12
12
53
1.71
25904--25945
20
2.2
20
95
4
77
21
16
16
45
1.86
25924--26214
35
8.2
35
79
3
296
18
19
19
42
1.90
25924--26214
71
4.1
71
81
3
300
18
19
19
42
1.90
26516--27239
30
24.0
30
89
1
957
21
14
16
47
1.83
27683--27842
29
5.7
28
82
7
166
16
16
24
42
1.88
30228--30268
21
1.9
22
90
5
66
21
21
9
46
1.80

Tables:   1

The End!