Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017315.1 Corchorus olitorius cultivar O-4 contig17348, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33085

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6525--6860
184
1.8
184
95
0
609
27
20
19
31
1.97
14039--14091
22
2.4
22
78
12
56
66
9
5
18
1.41
24746--24859
33
3.5
33
77
9
115
25
7
23
42
1.81
24736--24859
66
1.9
66
89
0
194
25
8
23
42
1.81
24806--24910
33
3.2
32
81
11
106
25
7
22
43
1.80
26663--26742
21
3.8
21
94
0
142
26
18
27
27
1.98
28161--28213
22
2.5
22
87
3
72
16
49
20
13
1.79

Tables:   1

The End!