Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017316.1 Corchorus olitorius cultivar O-4 contig17349, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11227

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6397--6889
36
14.1
36
84
8
615
17
20
19
42
1.89
6397--6889
71
7.0
72
84
8
606
17
20
19
42
1.89
6397--6885
107
4.7
107
84
6
574
17
20
19
42
1.90
6728--6858
62
2.1
62
94
0
226
18
19
19
42
1.89
6764--6822
26
2.3
26
93
0
100
16
20
20
42
1.89
6692--6966
98
2.8
98
87
1
392
19
19
18
42
1.90
6863--6919
26
2.2
26
81
3
71
21
19
19
40
1.92
7228--7980
30
25.1
30
88
1
1010
20
13
18
46
1.84
8501--8688
58
3.3
54
72
15
146
19
14
20
45
1.85
8553--8688
29
4.7
30
82
7
149
17
14
22
44
1.85
8780--8853
37
2.0
36
89
2
112
24
14
13
47
1.81

Tables:   1

The End!