Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017324.1 Corchorus olitorius cultivar O-4 contig17357, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9960

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2003--2038
19
1.9
18
88
5
54
41
2
22
33
1.68
6189--6227
6
6.5
6
87
0
60
30
0
0
69
0.89
6189--6239
18
2.8
18
84
0
66
31
1
0
66
1.03
7168--7222
22
2.6
21
74
5
56
47
3
9
40
1.53
7508--7543
18
2.1
18
89
5
56
44
5
11
38
1.63
8390--8425
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!