Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017334.1 Corchorus olitorius cultivar O-4 contig17367, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4557

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
127--183
25
2.3
26
75
9
64
33
1
5
59
1.30
983--1032
25
2.0
25
100
0
100
44
8
0
48
1.32
3455--3573
58
2.1
58
90
0
184
44
15
7
31
1.75
4160--4278
58
2.1
58
91
0
193
44
15
9
31
1.77

Tables:   1

The End!