Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017335.1 Corchorus olitorius cultivar O-4 contig17368, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75125

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5017--5058
21
2.0
21
85
0
57
28
11
21
38
1.89
9502--9538
13
2.8
13
87
0
56
16
43
8
32
1.77
14847--14885
20
2.0
20
85
5
53
46
2
12
38
1.56
27934--27971
18
2.1
19
90
5
60
28
10
42
18
1.83
29495--29546
25
2.1
25
88
0
77
34
17
7
40
1.78
43618--43720
53
1.9
53
86
0
143
39
5
22
32
1.78
49670--49752
41
2.0
41
95
0
148
28
10
26
33
1.90
62162--62551
143
2.7
144
88
2
579
22
27
17
32
1.96
62162--62538
48
7.9
48
87
2
499
22
28
16
32
1.96
72266--73439
445
2.7
439
84
5
1533
42
12
15
29
1.84
74919--74973
27
2.2
24
83
9
65
56
3
0
40
1.17

Tables:   1

The End!