Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017336.1 Corchorus olitorius cultivar O-4 contig17369, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22676

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
976--1042
3
22.3
3
100
0
134
65
0
0
34
0.93
1041--1079
3
13.0
3
100
0
78
33
0
33
33
1.58
5559--5590
12
2.8
12
95
4
57
43
6
0
50
1.27
8138--8182
24
1.9
23
86
4
63
51
6
2
40
1.41
15888--15919
2
16.0
2
93
0
55
46
3
0
50
1.17
18548--18622
39
1.9
39
91
0
123
8
9
26
56
1.59

Tables:   1

The End!