Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017337.1 Corchorus olitorius cultivar O-4 contig17370, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12460

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16--46
15
2.0
15
93
6
53
0
22
0
77
0.77
16--55
16
2.5
17
88
8
57
0
25
0
75
0.81
24--52
14
2.1
14
93
6
51
0
17
0
82
0.66
5085--5180
48
2.0
50
93
4
169
16
20
9
53
1.71
5522--5552
16
1.9
16
100
0
62
58
6
6
29
1.48
8108--8148
21
1.9
22
90
5
66
46
12
21
19
1.82
8213--8304
41
2.2
41
84
3
114
48
15
14
21
1.80
9628--9837
1
210.0
1
65
0
96
0
0
17
82
0.66
9628--9839
6
38.0
6
97
2
312
0
0
17
82
0.67
11109--11200
28
3.3
27
83
6
112
35
28
17
18
1.93
11447--11471
11
2.3
11
100
0
50
28
8
24
40
1.83
11729--11768
15
2.6
16
92
4
64
65
12
7
15
1.47

Tables:   1

The End!