Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017338.1 Corchorus olitorius cultivar O-4 contig17371, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14894

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5588--5652
32
2.1
32
85
8
89
41
7
10
40
1.69
5941--5980
15
2.6
16
92
4
64
65
12
7
15
1.47
8724--8754
12
2.6
12
94
0
53
0
19
32
48
1.49
9302--9346
21
2.4
19
85
14
58
46
26
17
8
1.78
9694--9718
6
4.2
6
100
0
50
16
0
0
84
0.63
10405--10440
19
1.9
18
88
5
54
41
8
22
27
1.82

Tables:   1

The End!