Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017348.1 Corchorus olitorius cultivar O-4 contig17381, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16710

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51--85
18
1.9
18
94
0
61
54
2
34
8
1.46
2841--2895
22
2.5
22
84
0
74
38
9
18
34
1.82
2885--2983
44
2.2
44
82
7
112
42
12
11
34
1.78
2924--2986
22
2.9
22
78
0
81
38
9
12
39
1.76
3085--3146
29
2.1
29
96
0
115
48
11
17
22
1.79
7017--7057
21
2.0
21
90
9
66
51
0
14
34
1.43
9371--9415
12
3.5
13
81
9
56
57
11
0
31
1.33
10906--10953
21
2.2
21
82
10
53
27
29
6
37
1.81
10916--10957
21
2.0
21
90
9
68
23
30
2
42
1.67
11364--11397
2
17.0
2
100
0
68
50
0
50
0
1.00
15789--15833
12
3.5
13
81
9
56
57
11
0
31
1.33
16244--16317
28
2.7
27
76
15
80
40
13
21
24
1.89

Tables:   1

The End!