Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017349.1 Corchorus olitorius cultivar O-4 contig17382, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4507

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
126--170
12
3.5
13
81
9
56
57
11
0
31
1.33
2444--2470
14
1.9
14
100
0
54
29
7
0
62
1.22
3609--3657
25
1.9
26
95
4
91
40
12
0
46
1.41
3610--3676
25
3.2
20
75
20
64
35
11
1
50
1.48

Tables:   1

The End!