Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017355.1 Corchorus olitorius cultivar O-4 contig17388, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14930

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2486--2511
12
2.2
12
100
0
52
50
7
0
42
1.31
2498--2547
26
1.9
26
88
8
75
44
4
4
48
1.40
3927--3960
2
17.5
2
93
6
61
52
0
0
47
1.00
4068--4359
43
6.8
42
84
11
371
22
11
25
41
1.86
4066--4359
129
2.3
126
91
4
473
22
11
24
41
1.87
9710--9754
21
2.2
21
85
14
60
4
44
2
48
1.35
10863--10941
29
2.7
29
88
7
106
26
16
11
45
1.81

Tables:   1

The End!