Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017362.1 Corchorus olitorius cultivar O-4 contig17395, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3099

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1650--1683
2
17.0
2
100
0
68
50
0
0
50
1.00
2536--2563
2
14.0
2
100
0
56
0
50
0
50
1.00
2885--2980
12
8.5
11
69
16
63
14
44
36
4
1.65
2860--2985
34
3.6
34
96
2
225
14
42
36
6
1.71
2886--2980
22
4.2
21
65
21
59
14
45
35
4
1.65

Tables:   1

The End!