Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017364.1 Corchorus olitorius cultivar O-4 contig17397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30360

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5165--5261
51
1.9
51
91
4
160
46
13
4
36
1.62
5240--5271
4
8.0
4
100
0
64
50
25
0
25
1.50
9055--9157
51
2.0
50
81
5
118
20
21
13
44
1.85
10929--10983
5
11.4
5
87
12
64
41
0
14
43
1.45
10933--10988
24
2.3
23
85
14
78
41
0
14
44
1.45
10929--10980
14
3.6
14
81
18
63
42
0
13
44
1.44
10929--10988
19
3.4
19
80
15
76
41
0
13
45
1.43
11054--11098
2
22.0
2
95
4
81
48
2
0
48
1.13
19700--19727
13
2.2
13
100
0
56
39
7
0
53
1.28

Tables:   1

The End!