Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017368.1 Corchorus olitorius cultivar O-4 contig17401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8969

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--46
2
19.0
2
100
0
76
50
0
0
50
1.00
1168--1238
12
6.2
12
70
9
58
36
0
28
35
1.58
2161--2292
65
2.0
65
100
0
264
36
17
25
20
1.94
4817--4863
11
4.2
11
86
2
58
19
31
19
29
1.96
5703--5727
7
3.6
7
100
0
50
64
24
0
12
1.27
6411--6438
8
3.5
8
100
0
56
64
0
25
10
1.26
7654--7690
19
2.0
19
89
5
58
40
8
24
27
1.83

Tables:   1

The End!