Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017378.1 Corchorus olitorius cultivar O-4 contig17411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6611

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2058--2099
15
2.7
15
85
3
57
14
7
14
64
1.48
2456--2501
22
2.1
22
92
4
76
41
8
13
36
1.75
2466--2522
27
2.2
27
84
9
75
49
8
10
31
1.68
2456--2502
21
2.2
21
88
7
69
40
8
14
36
1.77
5554--5608
21
2.6
21
88
0
74
16
49
21
12
1.79

Tables:   1

The End!