Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017379.1 Corchorus olitorius cultivar O-4 contig17412, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16422

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2922--2963
15
2.7
15
88
3
57
16
7
11
64
1.48
4959--4993
5
7.0
5
93
0
61
20
0
22
57
1.41
7126--7161
17
2.1
17
89
0
54
30
11
19
38
1.86
9692--9731
18
2.2
18
86
0
53
20
27
22
30
1.98
11244--11394
76
2.0
76
82
7
182
16
29
29
24
1.97
13527--13562
17
2.1
17
89
0
54
30
11
19
38
1.86
14540--14603
17
3.2
21
68
20
64
50
9
3
37
1.51
14528--14608
39
2.0
40
95
2
146
50
7
3
38
1.48
14599--14645
25
1.9
25
95
4
87
29
6
8
55
1.55

Tables:   1

The End!