Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017387.1 Corchorus olitorius cultivar O-4 contig17420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22113

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2246--2320
28
2.7
27
86
8
107
17
13
28
41
1.87
4482--4532
21
2.4
21
83
3
66
21
23
11
43
1.85
5621--5651
15
2.1
15
93
0
53
41
6
16
35
1.74
7657--7683
4
6.8
4
100
0
54
51
0
0
48
1.00
16676--16711
19
1.9
18
88
5
54
27
22
8
41
1.82
17544--17580
18
2.1
18
89
0
56
48
5
10
35
1.61

Tables:   1

The End!