Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017391.1 Corchorus olitorius cultivar O-4 contig17424, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19246

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1329--1710
193
2.0
193
91
0
611
45
16
9
28
1.79
3286--3353
21
3.2
21
72
2
64
13
23
44
19
1.85
3500--3557
21
2.8
21
97
0
107
12
27
55
5
1.58
6513--6552
21
1.9
21
84
0
53
35
15
5
45
1.68
9590--9629
19
2.2
18
86
4
53
30
20
5
45
1.72
12521--12923
54
7.6
53
82
7
385
30
24
17
27
1.97
12895--13339
35
12.8
35
86
2
574
38
19
14
27
1.90
12895--13340
209
2.1
208
89
2
671
39
19
14
27
1.90
13329--13528
54
3.7
54
90
0
283
34
18
16
31
1.93
14580--14663
40
2.0
42
86
6
118
41
11
11
34
1.79
14865--14916
16
3.1
16
75
20
52
7
15
0
76
0.99
14865--14912
19
2.8
17
79
14
53
8
14
0
77
0.99
14845--14909
26
2.5
26
87
12
89
9
18
1
70
1.21

Tables:   1

The End!