Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017410.1 Corchorus olitorius cultivar O-4 contig17443, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15169

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4276--4338
33
1.9
33
90
0
99
39
23
12
23
1.89
4360--4426
2
34.5
2
77
14
61
47
0
2
49
1.16
5154--5238
41
2.1
41
86
8
120
55
20
10
14
1.68
7276--7324
22
2.2
22
89
7
73
51
8
10
30
1.65
8656--8701
24
1.9
24
86
0
65
52
0
8
39
1.33
13617--13686
32
2.2
32
82
10
81
8
35
38
17
1.80

Tables:   1

The End!